Ugh, landed at my base to find the following missing:
- Door, again
- Windows
- Medium Refiner
- Construction terminal and gek
- Science terminal and korvax
- Teleporter
- global trade terminal
Wondering if I go up to space if I will have any frigates left or even a freighter.
Edit: luckily resolved this time by exiting out without saving, and reloading the game.